Index A | B | C | D | E | F | G | H | I | K | L | M | N | P | R | S | T | U A Analytics (class in gingerbread.analytics.analytics_module) arbitrary_types_allowed (gingerbread.config.config.BaseModel.Config attribute) B BaseModel (class in gingerbread.config.config) BaseModel.Config (class in gingerbread.config.config) C call_process() (gingerbread.realtime.realtime.RealTimeModule method) callback() (in module gingerbread.realtime.realtime_trigger) CentralProcessing (class in gingerbread.user_package_files.central_processing) CentralProcessingHandler (class in gingerbread.central_processing_handler.central_processing_handler) CentralProcessingInitModelsError CentralProcessingPostprocessImageError CentralProcessingPredictImageError CentralProcessingPreprocessImageError CentralProcessingProcessImageError check_connection() (in module gingerbread.rest.rest) check_version() (gingerbread.neotemplate.base_central_processing.CPNeoTemplate method) concat_results() (gingerbread.analytics.analytics_module.Analytics method) convert_class_to_binary() (gingerbread.analytics.analytics_module.Analytics method) copy_obj() (in module gingerbread.central_processing_handler.utils.helpers) correct_label_format() (in module gingerbread.central_processing_handler.utils.db_helpers) CPNeoTemplate (class in gingerbread.neotemplate.base_central_processing) D DatabaseLoadError DatabasePrepareRecordError DatabaseUploadError decode_payload() (in module gingerbread.central_processing_handler.utils.helpers) decode_weights_pickled() (in module gingerbread.central_processing_handler.utils.helpers) download_data() (gingerbread.data_download.MedqueryDataDownloader method) E encode_payload() (in module gingerbread.central_processing_handler.utils.helpers) encode_weights() (in module gingerbread.central_processing_handler.utils.helpers) extract() (in module gingerbread.rest.rest) F forward() (gingerbread.models.mock_model.MockModel method) (gingerbread.user_package_files.models.mock_model.MockModel method) G generate_analytics() (gingerbread.central_processing_handler.central_processing_handler.CentralProcessingHandler method) generate_cls_meta_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_cls_predicted_table_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_cls_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_cls_version_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_imported_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_mask_meta_table() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_mask_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_mask_table_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_mask_version_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_meta_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_pastel_color() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_project_series_meta_records() (in module gingerbread.central_processing_handler.utils.db_helpers) generate_thumb_mask_version_records() (in module gingerbread.central_processing_handler.utils.db_helpers) get_img_and_spacing() (gingerbread.realtime.realtime.RealTimeModule method) get_img_info() (in module gingerbread.central_processing_handler.utils.helpers) get_units() (gingerbread.analytics.analytics_module.Analytics method) gingerbread module gingerbread.analytics module gingerbread.analytics.analytics_module module gingerbread.central_processing_handler module gingerbread.central_processing_handler.central_processing_handler module gingerbread.central_processing_handler.config module gingerbread.central_processing_handler.config.config module gingerbread.central_processing_handler.config.exceptions module gingerbread.central_processing_handler.sql module gingerbread.central_processing_handler.utils module gingerbread.central_processing_handler.utils.db_helpers module gingerbread.central_processing_handler.utils.helpers module gingerbread.config module gingerbread.config.config module gingerbread.data_download module gingerbread.models module gingerbread.models.config module gingerbread.models.mock_model module gingerbread.neotemplate module gingerbread.neotemplate.base_central_processing module gingerbread.realtime module gingerbread.realtime.realtime module gingerbread.realtime.realtime_trigger module gingerbread.rest module gingerbread.rest.rest module gingerbread.system_conf module gingerbread.system_conf.systemconf module gingerbread.user_package_files module gingerbread.user_package_files.central_processing module gingerbread.user_package_files.models module gingerbread.user_package_files.models.mock_model module gingerbread.utils module gingerbread.utils.helpers module H hash_function() (in module gingerbread.central_processing_handler.utils.helpers) hdf5_to_nifti_all() (gingerbread.data_download.MedqueryDataDownloader method) hdf5_to_nifti_single() (gingerbread.data_download.MedqueryDataDownloader method) I init_model_from_mq() (gingerbread.central_processing_handler.central_processing_handler.CentralProcessingHandler method) invalidate_cache() (gingerbread.central_processing_handler.central_processing_handler.CentralProcessingHandler method) K kill_models() (gingerbread.central_processing_handler.central_processing_handler.CentralProcessingHandler method) L lesion_count() (gingerbread.analytics.analytics_module.Analytics method) lesion_volume_ml() (gingerbread.analytics.analytics_module.Analytics method) load_from_checkpoint() (gingerbread.neotemplate.base_central_processing.CPNeoTemplate method) load_state_dict() (gingerbread.models.mock_model.MockModel method) (gingerbread.user_package_files.models.mock_model.MockModel method) M MedqueryDataDownloader (class in gingerbread.data_download) MockModel (class in gingerbread.models.mock_model) (class in gingerbread.user_package_files.models.mock_model) model (gingerbread.config.config.ModelInput attribute) ModelInput (class in gingerbread.config.config) module gingerbread gingerbread.analytics gingerbread.analytics.analytics_module gingerbread.central_processing_handler gingerbread.central_processing_handler.central_processing_handler gingerbread.central_processing_handler.config gingerbread.central_processing_handler.config.config gingerbread.central_processing_handler.config.exceptions gingerbread.central_processing_handler.sql gingerbread.central_processing_handler.utils gingerbread.central_processing_handler.utils.db_helpers gingerbread.central_processing_handler.utils.helpers gingerbread.config gingerbread.config.config gingerbread.data_download gingerbread.models gingerbread.models.config gingerbread.models.mock_model gingerbread.neotemplate gingerbread.neotemplate.base_central_processing gingerbread.realtime gingerbread.realtime.realtime gingerbread.realtime.realtime_trigger gingerbread.rest gingerbread.rest.rest gingerbread.system_conf gingerbread.system_conf.systemconf gingerbread.user_package_files gingerbread.user_package_files.central_processing gingerbread.user_package_files.models gingerbread.user_package_files.models.mock_model gingerbread.utils gingerbread.utils.helpers mq (gingerbread.data_download.MedqueryDataDownloader attribute) mrsl_convert() (gingerbread.realtime.realtime.RealTimeModule method) multiclass_tester() (gingerbread.analytics.analytics_module.Analytics method) N nested_dict() (in module gingerbread.central_processing_handler.utils.helpers) P postprocess() (gingerbread.neotemplate.base_central_processing.CPNeoTemplate method) (gingerbread.user_package_files.central_processing.CentralProcessing method) predict_step() (gingerbread.neotemplate.base_central_processing.CPNeoTemplate method) (gingerbread.user_package_files.central_processing.CentralProcessing method) prepare_for_classification_upload() (in module gingerbread.central_processing_handler.utils.db_helpers) prepare_for_segmentation_upload() (in module gingerbread.central_processing_handler.utils.db_helpers) preprocess() (gingerbread.neotemplate.base_central_processing.CPNeoTemplate method) (gingerbread.user_package_files.central_processing.CentralProcessing method) R RealTimeModule (class in gingerbread.realtime.realtime) RealtimeProcessError run() (in module gingerbread.realtime.realtime_trigger) (in module gingerbread.rest.rest) run_classification_analytics() (gingerbread.analytics.analytics_module.Analytics method) run_general_analytics() (gingerbread.analytics.analytics_module.Analytics method) S save_checkpoint() (gingerbread.neotemplate.base_central_processing.CPNeoTemplate method) save_hyperparams() (gingerbread.neotemplate.base_central_processing.CPNeoTemplate method) segmentation_analysis() (gingerbread.analytics.analytics_module.Analytics method) send_to_analytics() (gingerbread.realtime.realtime.RealTimeModule method) start_processing() (gingerbread.central_processing_handler.central_processing_handler.CentralProcessingHandler method) str2bool() (in module gingerbread.central_processing_handler.utils.helpers) T timer() (in module gingerbread.central_processing_handler.utils.helpers) (in module gingerbread.utils.helpers) total_lesion_ml() (gingerbread.analytics.analytics_module.Analytics method) U upload_to_mq() (in module gingerbread.central_processing_handler.utils.db_helpers)